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Medical technology for comprehensive DNA analysis in tuberous sclerosis

https://doi.org/10.25557/2073-7998.2018.08.32-37

Abstract

We performed a comprehensive molecular genetic examination of 76 patients with tuberous sclerosis. For establish molecular diagnosis of the disease, we applied a new medical technology that includes targeted high-throughput parallel DNA sequencing (NGS), multiplex ligation-dependent probe amplification (MLPA), and Sanger sequencing. Search for point mutations and small indels in the TSC1 and TSC2 genes was carried out with next generation sequencing on the Ion S5 instrument. In order to filter out sequencing artifacts, to establish pathogenicity of the detected single nucleotide substitutions, and to identify familial cases, Sanger sequencing was performed. To search for extended deletions, the MLPA method was used. In 46% cases mutations have been detected, 70% in the TSC2 gene, and 30% in the TSC1 gene. Overwhelming majority of mutations were detected by NGS (91.9%), and 8.1% were detected by MLPA.

About the Authors

K. I. Anoshkin
Research Centre for Medical Genetics; Pirogov Russian National Research Medical University
Russian Federation


K. O. Karandasheva
Research Centre for Medical Genetics
Russian Federation


A. S. Tanas
Research Centre for Medical Genetics; Pirogov Russian National Research Medical University
Russian Federation


L. A. Bessonova
Research Centre for Medical Genetics
Russian Federation


N. A. Demina
Research Centre for Medical Genetics
Russian Federation


M. S. Petukhova
Research Centre for Medical Genetics
Russian Federation


I. V. Anisimova
Research Centre for Medical Genetics
Russian Federation


D. V. Zaletaev
Pirogov Russian National Research Medical University; I.M. Sechenov First Moscow State Medical University
Russian Federation


V. V. Strelnikov
Research Centre for Medical Genetics; Pirogov Russian National Research Medical University
Russian Federation


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Review

For citations:


Anoshkin K.I., Karandasheva K.O., Tanas A.S., Bessonova L.A., Demina N.A., Petukhova M.S., Anisimova I.V., Zaletaev D.V., Strelnikov V.V. Medical technology for comprehensive DNA analysis in tuberous sclerosis. Medical Genetics. 2018;17(8):32-37. (In Russ.) https://doi.org/10.25557/2073-7998.2018.08.32-37

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