ИНСТРУМЕНТЫ ГЕНОМНОЙ ИНЖЕНЕРИИ, ПРЕДНАЗНАЧЕННЫЕ ДЛЯ СОЗДАНИЯ ИЗОГЕННОЙ КЛЕТОЧНОЙ МОДЕЛИ БОКОВОГО АМИОТРОФИЧЕСКОГО СКЛЕРОЗА
https://doi.org/10.1234/XXXX-XXXX-2015-6-3-9
Аннотация
Об авторах
К. Р. ВалетдиноваРоссия
Е. И. Устьянцева
Россия
Е. А. Елисафенко
Россия
Д. О. Жарков
Россия
А. Е. Тупикин
Россия
М. Р. Кабилов
Россия
С. П. Медведев
Россия
С. М. Закиян
Россия
Список литературы
1. Abel O., Powell J.F., Andersen P.M. et al. ALSoD: Auser-friendly online bioinformatics tool for amyotrophic lateral sclerosis genetics // Hum. Mutat. - 2012. - Vol. 33, №9. - P. 1345-1351.
2. Boch J., Scholze H., Schornack S. et al. Breaking the code of DNA binding specificity of TAL-type III effectors // Science. — 2009. - Vol. 326, №5959. - P. 1509-1512.
3. Boulting G.L., Kiskinis E., Croft G.F. et al. A functionally characterized test set of human induced pluripotent stem cells // Nat. Biotechnol. - 2011. - Vol. 29, №3. - P. 279-286.
4. Cermak T., Doyle E.L., Christian M. et al. Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting // Nucleic Acids Res. - 2011. - Vol. 39, №12. - P. e82.
5. Chen H., Qian K., Du Z. et al. Modeling ALS with iPSCs reveals that mutant SOD1 misregulates neurofilament balance in motor neurons // Cell Stem Cell. - 2014. - Vol. 14, №6. -P. 796-809.
6. Cong L., Ran F.A., Cox D. et al. Multiplex genome engineering using CRISPR/Cas systems // Science. - 2013. - Vol. 339, №6121. - P. 819-823.
7. Dianov G.L. and Hubscher U. Mammalian base excision repair: the forgotten archangel // Nucleic Acids Res. - 2013. -Vol. 41, №6. - P. 3483-3490.
8. Dimos J.T., Rodolfa K.T., Niakan K.K. et al. Induced pluri-potent stem cells generated from patients with ALS can be differentiated into motor neurons // Science. - 2008. - Vol. 321, №5893. -P. 1218-1221.
9. Ding Q., Lee Y.K., Schaefer E.A. et al. A TALEN genome-editing system for generating human stem cell-based disease models // Cell Stem Cell. - 2013. - Vol. 12, №2. - P. 238-251.
10. Kim H., Um E., Cho S.R. et al. Surrogate reporters for enrichment of cells with nuclease-induced mutations // Nat. Methods. - 2011. - Vol. 8, №11. - P. 941-943.
11. Makarova K.S., Haft D.H., Barrangou R. et al. Evolution and classification of the CRISPR-Cas systems // Nat. Rev. Microbiol. - 2011. - Vol. 9, №6. - P. 467-477.
12. Mali P., Yang L., Esvelt K.M. et al. RNA-guided human genome engineering via Cas9 // Science. - 2013. - Vol. 339, №6121. - P. 823-826.
13. Martinez R.A., Stein J.L., Krostag A.R. et al. Genome engineering of isogenic human ES cells to model autism disorders // Nucleic Acids Res. - 2015. pii: gkv164
14. Miyaoka Y., Chan A.H., Judge L.M. et al. Isolation of single-base genome-edited human iPS cells without antibiotic selection // Nat. Methods. - 2014. - Vol. 11, №3. - P. 291-293.
15. Morbitzer R., Romer P., Boch J. et al. Regulation of selected genome loci using de novo-engineered transcription activator-like effector (TALE)-type transcription factors // Proc. Natl. Acad. Sci. USA. - 2010. - Vol. 107, №50. - P. 21617-21622.
16. Moscou M.J. and Bogdanove A.J. A simple cipher governs DNA recognition by TAL effectors // Science. - 2009. - Vol. 326, №5959. - P. 1501.
17. Perez E.E., Wang J., Miller J.C. et al. Establishment of HIV-1 resistance in CD4+ T cells by genome editing using zinc-fin-ger nucleases // Nat. Biotechnol. - 2008. - Vol. 26, №7. -P. 808-816.
18. Ran F.A., Hsu P.D., Lin C.Y. et al. Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity // Cell. - 2013. - Vol. 154, №6. - P. 1380-1389.
19. Ran F.A., Hsu P.D., Wright J. et al. Genome engineering using the CRISPR-Cas9 system // Nat. Protoc. - 2013. - Vol. 8, №11. - P. 2281-2308.
20. Romer P., Hahn S., Jordan T. et al. Plant pathogen recognition mediated by promoter activation of the pepper Bs3 resistance gene // Science. - 2007. - Vol. 318, №5850. - P. 645-648.
21. Rosen D.R. Mutations in Cu/Zn superoxide dismutase gene are associated with familial amyotrophic lateral sclerosis // Nature. - 1993. - Vol. 364, №6435. - P. 362.
22. Saleh-Gohari N., Helleday T. Conservative homologous recombination preferentially repairs DNA double-strand breaks in the S phase of the cell cycle in human cells // Nucleic Acids Res. -2004. - Vol. 32, №12. - P. 3683-3688.
23. Sanjana N.E., Cong L., Zhou Y. et al. A transcription activator-like effector toolbox for genome engineering // Nat. Protoc. — 2012. — Vol. 7, №1. — P. 171—192.
24. Soldner F., Laganiere J., Cheng A.W. et al. Generation of isogenic pluripotent stem cells differing exclusively at two early onset Parkinson point mutations // Cell. — 2011. — Vol. 146, №2. — P. 318—331.
25. Wainger B.J., Kiskinis E., Mellin C. et al. Intrinsic membrane hyperexcitability of amyotrophic lateral sclerosis patient-derived motor neurons // Cell Rep. — 2014. — Vol. 7, №1. — P. 1—11.
Рецензия
Для цитирования:
Валетдинова К.Р., Устьянцева Е.И., Елисафенко Е.А., Жарков Д.О., Тупикин А.Е., Кабилов М.Р., Медведев С.П., Закиян С.М. ИНСТРУМЕНТЫ ГЕНОМНОЙ ИНЖЕНЕРИИ, ПРЕДНАЗНАЧЕННЫЕ ДЛЯ СОЗДАНИЯ ИЗОГЕННОЙ КЛЕТОЧНОЙ МОДЕЛИ БОКОВОГО АМИОТРОФИЧЕСКОГО СКЛЕРОЗА. Медицинская генетика. 2015;14(6):3-9. https://doi.org/10.1234/XXXX-XXXX-2015-6-3-9
For citation:
Valetdinova K.R., Ustyantseva E.I., Elisaphenko E.A., Zharkov D.O., Tupikin A.E., Kabilov M.R., Medvedev S.P., Zakian S.M. GENOME ENGINEERING TOOLS TO GENERATE ISOGENIC CELLULAR MODEL OF AMYOTROPHIC LATERAL SCLEROSIS. Medical Genetics. 2015;14(6):3-9. https://doi.org/10.1234/XXXX-XXXX-2015-6-3-9
Послать статью по эл. почте 