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Analysis of mutation spectrum of COL1A1 and COL1A2 genes using massively parallel sequencing in patients with osteogenesis imperfecta in the Tomsk region

https://doi.org/10.25557/2073-7998.2020.01.38-45

Abstract

Using massively parallel sequencing, the COL1A1 and COL1A2 genes were analyzed in 16 patients from 10 families with osteogenesis imperfecta types I, III, and IV. To analyze the mutations in these genes, a panel of primers was developed for sequencing the complete gene sequence. As a result of the work, 10 mutations were revealed: six of them are in the COL1A1 gene, four mutations in the COL1A2 gene. All mutations, except one, were previously described in the literature and were found in patients with various types of osteogenesis imperfecta. Missense mutations were identified in five families, nonsense mutations in two families, splice site mutations in two cases, and a frameshift mutation in one patient. Unique mutations that were not repeated in unrelated patients were found in all families. The revealed high heterogeneity of the spectrum of mutations in the COL1A1 and COL1A2 genes in osteogenesis imperfecta indicates the effectiveness of using MPS-based methods for the diagnosis of this pathology.

About the Authors

N. A. Skryabin
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation

Skryabin Nikolay

Tomsk



O. Yu. Vasilyeva
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation
Tomsk


A. A. Sivtsev
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation
Tomsk


I. Zh. Zhalsanova
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation
Tomsk


A. E. Postrigan
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation
Tomsk


L. I. Minaicheva
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation
Tomsk


A. A. Agafonova
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation
Tomsk


V. V. Petrova
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation
Tomsk


L. P. Nazarenko
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation
Tomsk


G. N. Seitova
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation
Tomsk


E. O. Belyaeva
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation
Tomsk


M. N. Filimonova
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation
Tomsk


V. A. Stepanov
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Science
Russian Federation
Tomsk


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Review

For citations:


Skryabin N.A., Vasilyeva O.Yu., Sivtsev A.A., Zhalsanova I.Zh., Postrigan A.E., Minaicheva L.I., Agafonova A.A., Petrova V.V., Nazarenko L.P., Seitova G.N., Belyaeva E.O., Filimonova M.N., Stepanov V.A. Analysis of mutation spectrum of COL1A1 and COL1A2 genes using massively parallel sequencing in patients with osteogenesis imperfecta in the Tomsk region. Medical Genetics. 2020;19(1):38-45. (In Russ.) https://doi.org/10.25557/2073-7998.2020.01.38-45

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