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Сomprehensive chromosomal pathology diagnostic of derivative of the 4 chromosome and the small supernumerary marker chromosome

Abstract

Cytogenetic diagnosis performed only by GTG-staining does not provide sufficient reliability and accuracy in the identification of structurally rearranged chromosomes. To describe the karyotype in such cases, it is required to involve methods of molecular-cytogenetic analysis. The purpose of this study was to develop methods for testing, specification and correcting the results of primary cytogenetic diagnostics using complex methods of modern chromosomal analysis by two cases of patients with abnormal karyotypes. Separation and cultivation human peripheral blood lymphocytes, metaphase chromosome preparation, GTG-, CBG-, Ag-NOR-differential staining of chromosomes, chromosomal in situ suppression hybridization were done according to standard protocol. The creation of microdissection DNA probes and their quality control were performed as described previously. Chromosomes were counterstained with DAPI to visualize DNA after in situ hybridization. Inverted DAPI banding of chromosomes was used for chromosome identification, according to ISCN (2009). Using the GTG-, CBG-, Ag-NOR-staining of chromosomes, chromosomal in situ suppression hybridization with specially prepared microdissection DNA probes, the patient’s karyotype, previously described as 46,XX,der(4)t(4;?)(p12;?) or del(4)(p12p15.2), was determined as 46,XX,del(4)(p12p15.2), and the patient’s karyotype previously described as 47,XY,+22 was determined as 47,XY,+invdup(15)(q13). Applying methods of cytogenetic analysis, including methods of differential staining of chromosomes and fluorescent in situ hybridization with specially prepared DNA probes, allows to specify and, if necessary, to correct the description of the karyotype, resulting in accurate and reliable description of patient karyotypes. Clarification of the cytogenetic diagnosis is important for the medical-genetic predictions.

About the Authors

T. A. Gayner
Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of Russian Academy of Sciences; Center for Personalized Medicine, Ltd
Russian Federation


T. V. Karamysheva
Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences
Russian Federation


O. G. Karimova
Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of Russian Academy of Sciences; Center for Personalized Medicine, Ltd
Russian Federation


O. L. Koren
Centers of family medicine «Zdravitsa», Ltd
Russian Federation


V. V. Shloma
Institute of Molecular and Cellular Biology, Siberian Branch of the Russian Academy of Sciences; Novosibirsk State University
Russian Federation


A. R. Shorina
State Novosibirsk regional budgetary institution «Сity clinical hospital №1»
Russian Federation


A. G. Bogomolov
Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences
Russian Federation


N. B. Rubtsov
Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences; Novosibirsk State University
Russian Federation


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Review

For citations:


Gayner T.A., Karamysheva T.V., Karimova O.G., Koren O.L., Shloma V.V., Shorina A.R., Bogomolov A.G., Rubtsov N.B. Сomprehensive chromosomal pathology diagnostic of derivative of the 4 chromosome and the small supernumerary marker chromosome. Medical Genetics. 2017;16(12):9-17. (In Russ.)

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ISSN 2073-7998 (Print)