Benefits of noninvasive prenatal testing and chromosomal microarray analysis in prenatal diagnosis and screening: clinical cases
https://doi.org/10.25557/2073-7998.2023.03.24-34
Abstract
Background. Due to the continuous development and improvement of genetic research methods, the range of possible prenatally determined chromosomal abnormalities is expanding. The use of modern molecular genetic methods, the noninvasive prenatal testing (NIPT) and chromosomal microarray analysis (CMA), allows both the suspicion and diagnosis of chromosomal rearrangements that cannot be identified by standard cytogenetic testing.
Patients and methods. Two clinical cases of fetal chromosomal rearrangement are presented. Pregnant women underwent the first trimester prenatal screening and whole-genome NIPT. When indicated, invasive prenatal diagnosis (IPD) was performed, and the obtained material was sent for cytogenetic examination and CMA.
Results. Based on the results of prenatal screening in the first trimester of pregnancy, the patients were assigned to the high-risk group for fetal chromosomal abnormalities (CA) in both cases. A high risk of rare CA was established by the results of NIPT. IPD was performed with the consent of the patients. The results of cytogenetic studies and CMA determined an unbalanced karyotype with the presence of additional genetic material in the fetuses.
Conclusions. The use of modern molecular genetic methods in addition to traditional methods (the first trimester prenatal screening and standard cytogenetic analysis) allows us to increase the range of detectable CAs determined prenatally.
Keywords
About the Authors
M. T. KaplanovaRussian Federation
18, floor 2, room III, . Lesteva st., 3115162, Moscow
A. M. Galaktionova
Russian Federation
18, floor 2, room III, . Lesteva st., 3115162, Moscow
A. A. Potapov
Russian Federation
18, floor 2, room III, . Lesteva st., 3115162, Moscow
E. S. Kuznetsova
Russian Federation
18, floor 2, room III, . Lesteva st., 3115162, Moscow
E. E. Baranova
Russian Federation
18, floor 2, room III, . Lesteva st., 3115162, Moscow
2/1 Barrikadnaya str., Moscow, 125993
O. V. Sagaydak
Russian Federation
18, floor 2, room III, . Lesteva st., 3115162, Moscow
M. S. Belenikin
Russian Federation
18, floor 2, room III, . Lesteva st., 3115162, Moscow
9 Institutskiy per., Dolgoprudny, Moscow Region, 141701
G. Yu. Bobrovnik
Russian Federation
24A, Sevastopolsky ave., Moscow, 117209
V. L. Izhevskaya
Russian Federation
1, Moskvorechie st., Moscow, 115478
S. V. Martirosyan
Russian Federation
2/44, Salyama Adilya st., Moscow, 123423
A. S. Shkoda
Russian Federation
2/44, Salyama Adilya st., Moscow, 123423
References
1. Kaplanova M.T., Galaktionova A.M., Baranova E.E., Sagaydak O.V., Belenikin M.S., Denisov A.G. Otsenka mediko-ekonomicheskoy effektivnosti vnedreniya neinvazivnogo prenatal’nogo testa: mezhdunarodnyy opyt [Non-Invasive Prenatal Testing: the International Experience of Medical and Economic NIPT Efficiency Evaluation]. Vestnik RAMN [Annals of the Russian academy of medical sciences] 2022; 77(4): 276-284. doi: 10.15690/vramn2006 (In Russ.)
2. Olenev A.S., Baranova E.E., Sagaydak O.V., Galaktionova A.M., Belenikin M.S., Gnetetskaya V.A., Zobkova G.Yu., Kosova E.V., Makarova M.V., Songolova E.N. Mezhdunarodnyy opyt organizatsii provedeniya neinvazivnogo prenatal’nogo testa [International experience in organizing non-invasive prenatal testing]. Vopr. ginekol. akus. perinatol. (Gynecology, Obstetrics and Perinatology) 2021; 20(1): 129-137. DOI: 10.20953/1726-1678-2021-1-129-137 (In Russ.)
3. Olenev A.S., Baranova E.E., Sagaydak O.V., Kuznetsova E.S., Galaktionova A.M., Kaplanova M.T., Belenikin M.S., Gnetetskaya V.A., Songolova E.N. Sluchaynyye nakhodki pri ispol’zovanii polnogenomnogo neinvazivnogo prenatal’nogo testa: klinicheskiye i eticheskiye aspekty [Random findings in the use of a whole genome noninvasive prenatal test: clinical and ethical aspects]. Problemy Reproduktsii (Russian Journal of Human Reproduction) 2021; 27(1): 78-87. (In Russ.). https://doi.org/10.17116/repro20212701178
4. Bedei I., Wolter A., Weber A., et al. Chances and Challenges of New Genetic Screening Technologies (NIPT) in Prenatal Medicine from a Clinical Perspective: A Narrative Review. Genes (Basel) 2021; 12(4): 501. doi: 10.3390/genes12040501
5. Zaninović L., Bašković M., Ježek D. et al. Validity and Utility of Non-Invasive Prenatal Testing for Copy Number Variations and Microdeletions: A Systematic Review. Journal of Clinical Medicine 2022; 11(12): 3350. doi:10.3390/jcm11123350
6. Van den Veyver I.B. Recent advances in prenatal genetic screening and testing. F1000Res. 2016 Oct 28; 5: 2591. doi: 10.12688/f1000research.9215.1.
7. Liu X., Liu S., Wang H., Hu T. Potentials and challenges of chromosomal microarray analysis in prenatal diagnosis. Front Genet. 2022 Jul 26; 13: 938183. doi: 10.3389/fgene.2022.938183
8. Shaffer L.G., Rosenfeld J.A., Dabell M.P., et al. Detection rates of clinically significant genomic alterations by microarray analysis for specific anomalies detected by ultrasound. Prenatal Diagnosis 2012; 32(10): 986-95. doi: 10.1002/pd.3943
9. Srebniak M.I., Diderich K.E., Joosten M., et al. Prenatal SNP array testing in 1000 fetuses with ultrasound anomalies: causative, unexpected and susceptibility CNVs. European Journal of Human Genetics 2015; 24(5): 645-51. doi: 10.1038/ejhg.2015.193
10. Wapner R.J., Martin C.L., Levy B., et al. Chromosomal Microarray versus Karyotyping for Prenatal Diagnosis. New England Journal of Medicine 2012; 367(23): 2175-84. doi: 10.1056/nejmoa1203382
11. Grande M., Jansen F.A.R., Blumenfeld Y.J., et al. Genomic microarray in fetuses with increased nuchal translucency and normal karyotype: a systematic review and meta-analysis. Ultrasound in Obstetrics & Gynecology 2015; 46(6): 650-8. doi: 10.1002/uog.14880
12. Levy B., Wapner, R. Prenatal diagnosis by chromosomal microarray analysis. Fertility and sterility 2018; 109(2): 201-212. doi: 10.1016/j.fertnstert.2018.01.005
13. Dugoff L., Norton M.E., Kuller J.A. The use of chromosomal microarray for prenatal diagnosis. American Journal of Obstetrics and Gynecology 2016; 215(4): B2-9. doi: 10.1016/j.ajog.2016.07.016
14. American College of Obstetricians and Gynecologists Committee on Genetics. Committee Opinion No. 581: the use of chromosomal microarray analysis in prenatal diagnosis. Obstet Gynecol. 2013; 122(6): 1374-7. doi: 10.1097/01.AOG.0000438962.16108.d1.
15. Riggs E.R., Andersen E.F., Cherry A.M., et al. Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020; 22(2): 245-257. doi: 10.1038/s41436-019-0686-8.
16. Antonenko V.G., Svetlychnaya D.V., Djurcova N.V., Haritonova N.A., Shilova N.V. Sluchay sindroma Emanuel’ u novorozhdennoy devochki s vrozhdennym porokom serdtsa [A case of Emanuel syndrome on a newborn girl with congenital heart defect]. Meditsinskaya genetika [Medical Genetics] 2019; 18(9): 34-39. (In Russ.) https://doi.org/10.25557/2073-7998.2019.09.34-39
17. Baranov V.S., Kuznetsova T.V. Tsitogenetika embrional’nogo razvitiya cheloveka: Nauchno-prakticheskiye aspekty Tsitogenetika embrional’nogo razvitiya cheloveka: Nauchno-prakticheskiye aspekty [Cytogenetics of human embryonic development: Scientific and practical aspects]. SPb: Izdatel’stvo N-L [St. Petersburg: Publishing house N-L]. 2006. 640 p. (In Russ.)
18. Shilova N.V. Autosomnyye retsiproknyye translokatsii: prenatal’naya selektsiya, segregatsiya i otsenka empiricheskogo riska rozhdeniya zhiznesposobnogo rebenka s khromosomnym disbalansom pri semeynom nositel’stve [Autosomal reciprocal translocations: prenatal selection, segregation and assessment of empirical risks for reciprocal translocation carriers of having a liveborn child with chromosome imbalance]. Meditsinskaya genetika [Medical Genetics] 2018; 17(1): 41-49. (In Russ.) https://doi.org/10.25557/2073-7998.2018.01.41-49
Review
For citations:
Kaplanova M.T., Galaktionova A.M., Potapov A.A., Kuznetsova E.S., Baranova E.E., Sagaydak O.V., Belenikin M.S., Bobrovnik G.Yu., Izhevskaya V.L., Martirosyan S.V., Shkoda A.S. Benefits of noninvasive prenatal testing and chromosomal microarray analysis in prenatal diagnosis and screening: clinical cases. Medical Genetics. 2023;22(3):24-34. (In Russ.) https://doi.org/10.25557/2073-7998.2023.03.24-34