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Differences in the level of inbreeding in populations of Dagestan: analysis of runs of homozygosity

https://doi.org/10.25557/2073-7998.2020.07.21-22

Abstract

The genomic data analysis (~907750 autosomal SNPs) allowed us to estimate the inbreeding level based on the analysis of runs of homozygosity (Froh) in the group of 518 people from 23 indigenous Dagestan peoples. As a result, the number and total length of ROH, as well as the FROH coefficient, show a significant diversity in the indigenous Dagestan populations both inside and between them. One of the highest values of the inbreeding coefficient (FROH> 1.5Mb) is observed for the Ginukhs, Gunzibians, Akhvakhs, Bezhtins, and Tsez, as compared with the other world populations.

About the Authors

N. A. Kolesnikov
Research Institute of Medical Genetics, Tomsk National Medical Research Center
Russian Federation


V. N. Kharkov
Research Institute of Medical Genetics, Tomsk National Medical Research Center
Russian Federation


M. O. Radzhabov
Dagestan State Medical University
Russian Federation


A. A. Zarubin
Research Institute of Medical Genetics, Tomsk National Medical Research Center
Russian Federation


S. S. Litvinov
Institute of Biochemistry and Genetics, Ufa Scientific Center, Russian Academy of Sciences
Russian Federation


N. V. Ekomasova
Institute of Biochemistry and Genetics, Ufa Scientific Center, Russian Academy of Sciences
Russian Federation


E. K. Khusnutdinova
Institute of Biochemistry and Genetics, Ufa Scientific Center, Russian Academy of Sciences
Russian Federation


V. A. Stepanov
Research Institute of Medical Genetics, Tomsk National Medical Research Center
Russian Federation


Review

For citations:


Kolesnikov N.A., Kharkov V.N., Radzhabov M.O., Zarubin A.A., Litvinov S.S., Ekomasova N.V., Khusnutdinova E.K., Stepanov V.A. Differences in the level of inbreeding in populations of Dagestan: analysis of runs of homozygosity. Medical Genetics. 2020;19(7):21-22. (In Russ.) https://doi.org/10.25557/2073-7998.2020.07.21-22

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ISSN 2073-7998 (Print)