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Single-cell RNA Sequencing Data Analysis Reveals Structural Diversity of T-lymphocyte and Macrophage Infiltration in Atherosclerosis

https://doi.org/10.25557/2073-7998.2022.07.43-45

Abstract

Atherosclerosis is a multicomponent disease that depends on immune response, and physiological condition of the arteries. Innate and adaptive immunity act as a driver of the pathogenesis of atherosclerosis rather than play an atheroprotective role. T-lymphocytes, as a key part of the immune response, can exhibit both pro- and anti-atherogenic properties. In this regard, the study of this cell population is of particular interest. In the present study, we performed the analysis of T-cells subpopulations depending on the T-cells to macrophages ratio. We applied bioinformatics methods to three single-cell RNA-sequencing datasets of human coronary and carotid arteries downloaded from the SRA database (SRP199578, SRP274629, SRP287809). The present study demonstrated a direct proportionality between CD8+ T memory stem cells (TSCM) and the ratio of the CD8+ T cells pool to the macrophage pool. In addition, we revealed differences in TSCM receptors (IL2RA, SELP, LEPR, SDC2, CCR6, TGFBR3, IL1R2, CD247, CXCR6, LIFR, ERBB3) that are involved in ligand-receptor interactions with other atherosclerotic plaques cell populations, between two groups of patients with high and low CD8+ T-cells to macrophages ratio.

About the Authors

A. R. Diagel
Siberian State Medical University
Russian Federation


A. A. Zarubin
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences
Russian Federation


M. S. Nazarenko
Siberian State Medical University; Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences
Russian Federation


A. A. Sleptcov
Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences
Russian Federation


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Review

For citations:


Diagel A.R., Zarubin A.A., Nazarenko M.S., Sleptcov A.A. Single-cell RNA Sequencing Data Analysis Reveals Structural Diversity of T-lymphocyte and Macrophage Infiltration in Atherosclerosis. Medical Genetics. 2022;21(7):43-45. (In Russ.) https://doi.org/10.25557/2073-7998.2022.07.43-45

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ISSN 2073-7998 (Print)