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<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">medgen</journal-id><journal-title-group><journal-title xml:lang="ru">Медицинская генетика</journal-title><trans-title-group xml:lang="en"><trans-title>Medical Genetics</trans-title></trans-title-group></journal-title-group><issn pub-type="ppub">2073-7998</issn><publisher><publisher-name>Publishing House «Genius Media» LLC</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.25557/2073-7998.2024.09.3-17</article-id><article-id custom-type="elpub" pub-id-type="custom">medgen-2551</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>НАУЧНЫЙ ОБЗОР</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>REVIEW</subject></subj-group></article-categories><title-group><article-title>Обзор текущих исследований по разработке генной терапии  на основе геномного редактирования для лечения муковисцидоза</article-title><trans-title-group xml:lang="en"><trans-title>Review of current research on the development of gene therapy  for cystic fibrosis using genome editing techniques</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Смирнихина</surname><given-names>С. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Smirnikhina</surname><given-names>S. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p> Смирнихина Светлана Анатольевна</p><p>115522, г. Москва, ул. Москворечье, д. 1</p></bio><bio xml:lang="en"><p>Svetlana A. Smirnikhina</p><p>1, Moskvorechye st., Moscow, 115522</p></bio><email xlink:type="simple">smirnikhinas@gmail.com</email><xref ref-type="aff" rid="aff-1"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru"><institution>ФГБНУ Медико-генетический научный центр имени академика Н.П. Бочкова</institution><country>Россия</country></aff><aff xml:lang="en"><institution>Research Centre for Medical Genetics</institution><country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2024</year></pub-date><pub-date pub-type="epub"><day>04</day><month>12</month><year>2024</year></pub-date><volume>23</volume><issue>9</issue><fpage>3</fpage><lpage>17</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Смирнихина С.А., 2024</copyright-statement><copyright-year>2024</copyright-year><copyright-holder xml:lang="ru">Смирнихина С.А.</copyright-holder><copyright-holder xml:lang="en">Smirnikhina S.A.</copyright-holder><license xml:lang="ru" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>Данная работа распространяется под лицензией Creative Commons Attribution 4.0.</license-p></license><license xml:lang="en" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://www.medgen-journal.ru/jour/article/view/2551">https://www.medgen-journal.ru/jour/article/view/2551</self-uri><abstract><p>Муковисцидоз (МВ) – частое моногенное заболевание, возникающее в результате мутаций в гене CFTR. Патогенетическая терапия, несмотря на ее высокую эффективность, подходит не всем пациентам, является пожизненной и сопряжена с побочными эффектами. В связи с этим в мире ведутся масштабные исследования, направленные на разработку этиотропной терапии МВ, в частности, основанные на геномном редактировании. В обзоре рассмотрены некоторые недостатки существующей терапии, описаны методы геномного редактирования и проанализированы опубликованные на текущий момент данные по генной терапии МВ с использованием методов геномного редактирования.</p></abstract><trans-abstract xml:lang="en"><p>Cystic fibrosis (CF) is a prevalent monogenic disease caused by mutations in the CFTR gene. Although pathogenetic therapy is highly effective, it is not suitable for all patients, requires lifelong treatment, and is associated with side effects. Consequently, extensive research is being conducted globally to develop etiotropic therapy for CF, particularly focusing on genome editing methods. This review explores the limitations of current therapy, outlines genome editing techniques, and evaluates all currently available data on gene therapy for CF utilizing genome editing techniques</p></trans-abstract><kwd-group xml:lang="ru"><kwd>муковисцидоз</kwd><kwd>геномное редактирование</kwd><kwd>CRISPR-Cas</kwd><kwd>клеточные линии</kwd><kwd>F508del</kwd></kwd-group><kwd-group xml:lang="en"><kwd>cystic fibrosis</kwd><kwd>genome editing</kwd><kwd>CRISPR-Cas</kwd><kwd>cell lines</kwd><kwd>F508del</kwd></kwd-group><funding-group><funding-statement xml:lang="ru">Работа выполнена в рамках государственного задания Минобрнауки России для ФГБНУ МГНЦ</funding-statement><funding-statement xml:lang="en">The study has been funded by the state assignment of the Ministry of Science and Higher Education of the Russian Federation.</funding-statement></funding-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Derichs N. Targeting a genetic defect: cystic fibrosis transmembrane conductance regulator modulators in cystic fibrosis. Eur. Respir. Rev. 2013; 22: 58-65.</mixed-citation><mixed-citation xml:lang="en">Derichs N. Targeting a genetic defect: cystic fibrosis transmembrane conductance regulator modulators in cystic fibrosis. Eur. Respir. Rev. 2013; 22: 58-65.</mixed-citation></citation-alternatives></ref><ref id="cit2"><label>2</label><citation-alternatives><mixed-citation xml:lang="ru">Berger H.A., Anderson M.P., Gregory R.J. et al. Identification and regulation of the cystic fibrosis transmembrane conductance regulator-generated chloride channel. J. Clin. Invest. 1991; 88: 1422-31.</mixed-citation><mixed-citation xml:lang="en">Berger H.A., Anderson M.P., Gregory R.J. et al. Identification and regulation of the cystic fibrosis transmembrane conductance regulatorgenerated chloride channel. J. Clin. Invest. 1991; 88: 1422-31.</mixed-citation></citation-alternatives></ref><ref id="cit3"><label>3</label><citation-alternatives><mixed-citation xml:lang="ru">Choi J.Y., Muallem D., Kiselyov K. et al. Aberrant CFTR-dependent HCO3-transport in mutations associated with cystic fibrosis. Nature 2001; 410: 94-7.</mixed-citation><mixed-citation xml:lang="en">Choi J.Y., Muallem D., Kiselyov K. et al. Aberrant CFTR-dependent HCO3-transport in mutations associated with cystic fibrosis. Nature 2001; 410: 94-7.</mixed-citation></citation-alternatives></ref><ref id="cit4"><label>4</label><citation-alternatives><mixed-citation xml:lang="ru">Vertex Pharmaceuticals Incorporated. Trikafta (elexacaftor, tezacaftor, and ivacaftor tablets; ivacaftor tablets) [package insert]. U.S. Food and Drug Administration website. https://www.accessdata.fda.gov/drugsatfda_docs/label/2021/212273s004lbl.pdf. Revised June 2021. Accessed January 21, 2024.</mixed-citation><mixed-citation xml:lang="en">Vertex Pharmaceuticals Incorporated. Trikafta (elexacaftor, tezacaftor, and ivacaftor tablets; ivacaftor tablets) [package insert]. U.S. Food and Drug Administration website. https://www.accessdata.fda.gov/drugsatfda_docs/label/2021/212273s004lbl.pdf. Revised June 2021. Accessed January 21, 2024.</mixed-citation></citation-alternatives></ref><ref id="cit5"><label>5</label><citation-alternatives><mixed-citation xml:lang="ru">Merali Z. Life-changing cystic fibrosis treatment wins US$3-million Breakthrough Prize. Nature. 2023 Sep;621(7979):450-451. doi: 10.1038/d41586-023-02890-1.</mixed-citation><mixed-citation xml:lang="en">Merali Z. Life-changing cystic fibrosis treatment wins US$3-million Breakthrough Prize. Nature. 2023 Sep;621(7979):450-451. doi: 10.1038/d41586-023-02890-1.</mixed-citation></citation-alternatives></ref><ref id="cit6"><label>6</label><citation-alternatives><mixed-citation xml:lang="ru">Bacalhau M., Camargo M., Magalhães-Ghiotto G.A.V., et al. Elexacaftor-Tezacaftor-Ivacaftor: A Life-Changing Triple Combination of CFTR Modulator Drugs for Cystic Fibrosis. Pharmaceuticals (Basel). 2023 Mar 8;16(3):410. doi: 10.3390/ph16030410.</mixed-citation><mixed-citation xml:lang="en">Bacalhau M., Camargo M., Magalhães-Ghiotto G.A.V., et al. Elexacaftor-Tezacaftor-Ivacaftor: A Life-Changing Triple Combination of CFTR Modulator Drugs for Cystic Fibrosis. Pharmaceuticals (Basel). 2023 Mar 8;16(3):410. doi: 10.3390/ph16030410.</mixed-citation></citation-alternatives></ref><ref id="cit7"><label>7</label><citation-alternatives><mixed-citation xml:lang="ru">Manciulli T., Bresci S., Mencarini J., et al. Prevalence of adverse events in cystic fibrosis patients treated with elexacaftor/tezacaftor/ivacaftor: Experience of the regional referral center in Tuscany, Italy. Pediatr Pulmonol. 2023 Dec;58(12):3626-3629. doi: 10.1002/ppul.26673.</mixed-citation><mixed-citation xml:lang="en">Manciulli T., Bresci S., Mencarini J., et al. Prevalence of adverse events in cystic fibrosis patients treated with elexacaftor/tezacaftor/ ivacaftor: Experience of the regional referral center in Tuscany, Italy. Pediatr Pulmonol. 2023 Dec;58(12):3626-3629. doi: 10.1002/ppul.26673.</mixed-citation></citation-alternatives></ref><ref id="cit8"><label>8</label><citation-alternatives><mixed-citation xml:lang="ru">Zhang L., Albon D., Jones M., Bruschwein H. Impact of elexacaftor/ tezacaftor/ivacaftor on depression and anxiety in cystic fibrosis. Ther Adv Respir Dis. 2022 Jan-Dec;16:17534666221144211. doi: 10.1177/17534666221144211.</mixed-citation><mixed-citation xml:lang="en">Zhang L., Albon D., Jones M., Bruschwein H. Impact of elexacaftor/ tezacaftor/ivacaftor on depression and anxiety in cystic fibrosis. Ther Adv Respir Dis. 2022 Jan-Dec;16:17534666221144211. doi: 10.1177/17534666221144211.</mixed-citation></citation-alternatives></ref><ref id="cit9"><label>9</label><citation-alternatives><mixed-citation xml:lang="ru">Arslan M., Chalmers S., Rentfrow K., et al. Suicide attempts in adolescents with cystic fibrosis on Elexacaftor/Tezacaftor/Ivacaftor therapy. J Cyst Fibros. 2023 May;22(3):427-430. doi: 10.1016/j.jcf.2023.01.015.</mixed-citation><mixed-citation xml:lang="en">Arslan M., Chalmers S., Rentfrow K., et al. Suicide attempts in adolescents with cystic fibrosis on Elexacaftor/Tezacaftor/Ivacaftor therapy. J Cyst Fibros. 2023 May;22(3):427-430. doi: 10.1016/j.jcf.2023.01.015.</mixed-citation></citation-alternatives></ref><ref id="cit10"><label>10</label><citation-alternatives><mixed-citation xml:lang="ru">Калиновская Е. В России зарегистрирован тройной комбинированный препарат от муковисцидоза, Фармацевтический вестник, 19.06.2023, https://pharmvestnik.ru/content/news/V-Rossii-zaregistrirovan-troinoi-kombinirovannyi-preparatot-mukoviscidoza.html. Дата доступа: 23.01.2024</mixed-citation><mixed-citation xml:lang="en">Kalinovskaya E. V Rossii zaregistrirovan troynoy kombinirovannyy preparat ot mukovistsidoza, [A triple combination drug for cystic fibrosis has been registered in Russia]. Farmatsevticheskiy vestnik [Pharmaceutical Bulletin]. 19.06.2023, https://pharmvestnik.ru/content/news/V-Rossii-zaregistrirovan-troinoi-kombinirovannyi-preparat-ot-mukoviscidoza.html. Access date: 23.01.2024 (In Russ.)</mixed-citation></citation-alternatives></ref><ref id="cit11"><label>11</label><citation-alternatives><mixed-citation xml:lang="ru">Aposhian H.V. The use of DNA for gene therapy--the need, experimental approach, and implications. Perspect Biol Med. 1970 Autumn;14(1):98-108. doi: 10.1353/pbm.1970.0011.</mixed-citation><mixed-citation xml:lang="en">Aposhian H.V. The use of DNA for gene therapy--the need, experimental approach, and implications. Perspect Biol Med. 1970 Autumn;14(1):98-108. doi: 10.1353/pbm.1970.0011.</mixed-citation></citation-alternatives></ref><ref id="cit12"><label>12</label><citation-alternatives><mixed-citation xml:lang="ru">Collins F.S., Riordan J.R., Tsui L.C. The cystic fibrosis gene: isolation and significance. Hosp Pract (Off Ed). 1990 Oct 15;25(10):47- 57. doi: 10.1080/21548331.1990.11704019.</mixed-citation><mixed-citation xml:lang="en">Collins F.S., Riordan J.R., Tsui L.C. The cystic fibrosis gene: isolation and significance. Hosp Pract (Off Ed). 1990 Oct 15;25(10):47-57. doi: 10.1080/21548331.1990.11704019.</mixed-citation></citation-alternatives></ref><ref id="cit13"><label>13</label><citation-alternatives><mixed-citation xml:lang="ru">Aitken M.L., Moss R.B., Waltz D.A., et al. A phase I study of aerosolized administration of tgAAVCF to cystic fibrosis subjects with mild lung disease. Hum Gene Ther. 2001 Oct 10;12(15):1907-16. doi: 10.1089/104303401753153956.</mixed-citation><mixed-citation xml:lang="en">Aitken M.L., Moss R.B., Waltz D.A., et al. A phase I study of aerosolized administration of tgAAVCF to cystic fibrosis subjects with mild lung disease. Hum Gene Ther. 2001 Oct 10;12(15):1907-16. doi: 10.1089/104303401753153956.</mixed-citation></citation-alternatives></ref><ref id="cit14"><label>14</label><citation-alternatives><mixed-citation xml:lang="ru">Flotte T.R., Schwiebert E.M., Zeitlin P.L., Carter B.J., Guggino W.B. Correlation between DNA transfer and cystic fibrosis airway epithelial cell correction after recombinant adeno-associated virus serotype 2 gene therapy. Hum Gene Ther. 2005 Aug;16(8):921-8. doi: 10.1089/hum.2005.16.921.</mixed-citation><mixed-citation xml:lang="en">Flotte T.R., Schwiebert E.M., Zeitlin P.L., Carter B.J., Guggino W.B. Correlation between DNA transfer and cystic fibrosis airway epithelial cell correction after recombinant adeno-associated virus serotype 2 gene therapy. Hum Gene Ther. 2005 Aug;16(8):921-8. doi: 10.1089/hum.2005.16.921.</mixed-citation></citation-alternatives></ref><ref id="cit15"><label>15</label><citation-alternatives><mixed-citation xml:lang="ru">Flotte T.R., Zeitlin P.L., Reynolds T.C., et al. Phase I trial of intranasal and endobronchial administration of a recombinant adeno-associated virus serotype 2 (rAAV2)-CFTR vector in adult cystic fibrosis patients: a two-part clinical study. Hum Gene Ther. 2003 Jul 20;14(11):1079-88. doi: 10.1089/104303403322124792.</mixed-citation><mixed-citation xml:lang="en">Flotte T.R., Zeitlin P.L., Reynolds T.C., et al. Phase I trial of intranasal and endobronchial administration of a recombinant adenoassociated virus serotype 2 (rAAV2)-CFTR vector in adult cystic fibrosis patients: a two-part clinical study. Hum Gene Ther. 2003 Jul 20;14(11):1079-88. doi: 10.1089/104303403322124792.</mixed-citation></citation-alternatives></ref><ref id="cit16"><label>16</label><citation-alternatives><mixed-citation xml:lang="ru">Alton E.W.F.W., Armstrong D.K., Ashby D., Bayfield K.J., Bilton D., Bloomfield E.V., et al. A randomised, double-blind, placebo-controlled trial of repeated nebulisation of non-viral cystic fibrosis transmembrane conductance regulator (CFTR) gene therapy in patients with cystic fibrosis. Efficacy Mech Eval 2016;3(5) doi: 10.3310/eme03050</mixed-citation><mixed-citation xml:lang="en">Alton E.W.F.W., Armstrong D.K., Ashby D., Bayfield K.J., Bilton D., Bloomfield E.V., et al. A randomised, double-blind, placebocontrolled trial of repeated nebulisation of non-viral cystic fibrosis transmembrane conductance regulator (CFTR) gene therapy in patients with cystic fibrosis. Efficacy Mech Eval 2016;3(5) doi: 10.3310/eme03050</mixed-citation></citation-alternatives></ref><ref id="cit17"><label>17</label><citation-alternatives><mixed-citation xml:lang="ru">Cox D.B., Platt R.J., Zhang F. Therapeutic genome editing: prospects and challenges. Nat Med. 2015 Feb;21(2):121-31. doi: 10.1038/nm.3793.</mixed-citation><mixed-citation xml:lang="en">Cox D.B., Platt R.J., Zhang F. Therapeutic genome editing: prospects and challenges. Nat Med. 2015 Feb;21(2):121-31. doi: 10.1038/nm.3793.</mixed-citation></citation-alternatives></ref><ref id="cit18"><label>18</label><citation-alternatives><mixed-citation xml:lang="ru">Komor A.C., Kim Y.B., Packer M.S., Zuris J.A., Liu D.R. Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage. Nature. 2016 May 19;533(7603):420-4. doi: 10.1038/nature17946.</mixed-citation><mixed-citation xml:lang="en">Komor A.C., Kim Y.B., Packer M.S., Zuris J.A., Liu D.R. Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage. Nature. 2016 May 19;533(7603):420- 4. doi: 10.1038/nature17946.</mixed-citation></citation-alternatives></ref><ref id="cit19"><label>19</label><citation-alternatives><mixed-citation xml:lang="ru">Anzalone A.V., Randolph P.B., Davis J.R., et al. Search-and-replace genome editing without double-strand breaks or donor DNA. Nature. 2019 Dec;576(7785):149-157. doi: 10.1038/s41586-019-1711-4.</mixed-citation><mixed-citation xml:lang="en">Anzalone A.V., Randolph P.B., Davis J.R., et al. Search-and-replace genome editing without double-strand breaks or donor DNA. Nature. 2019 Dec;576(7785):149-157. doi: 10.1038/s41586-019-1711-4.</mixed-citation></citation-alternatives></ref><ref id="cit20"><label>20</label><citation-alternatives><mixed-citation xml:lang="ru">Farmen S.L., Karp P.H., Ng P., et al. Gene transfer of CFTR to airway epithelia: low levels of expression are sufficient to correct Cltransport and overexpression can generate basolateral CFTR. Am J Physiol Lung Cell Mol Physiol. 2005 Dec;289(6):L1123-30. doi: 10.1152/ajplung.00049.2005.</mixed-citation><mixed-citation xml:lang="en">Farmen S.L., Karp P.H., Ng P., et al. Gene transfer of CFTR to airway epithelia: low levels of expression are sufficient to correct Cl- transport and overexpression can generate basolateral CFTR. Am J Physiol Lung Cell Mol Physiol. 2005 Dec;289(6):L1123-30. doi: 10.1152/ajplung.00049.2005.</mixed-citation></citation-alternatives></ref><ref id="cit21"><label>21</label><citation-alternatives><mixed-citation xml:lang="ru">Johnson L.G., Olsen J.C., Sarkadi B., et al.. Efficiency of gene transfer for restoration of normal airway epithelial function in cystic fibrosis. Nat Genet. 1992 Sep;2(1):21-5. doi: 10.1038/ng0992-21.</mixed-citation><mixed-citation xml:lang="en">Johnson L.G., Olsen J.C., Sarkadi B., et al.. Efficiency of gene transfer for restoration of normal airway epithelial function in cystic fibrosis. Nat Genet. 1992 Sep;2(1):21-5. doi: 10.1038/ng0992-21.</mixed-citation></citation-alternatives></ref><ref id="cit22"><label>22</label><citation-alternatives><mixed-citation xml:lang="ru">Limberis M., Anson D.S., Fuller M., Parsons D.W. Recovery of airway cystic fibrosis transmembrane conductance regulator function in mice with cystic fibrosis after single-dose lentivirus-mediated gene transfer. Hum Gene Ther. 2002 Nov 1;13(16):1961-70. doi: 10.1089/10430340260355365. Erratum in: Hum Gene Ther. 2002 Nov 20;13(17)2112.</mixed-citation><mixed-citation xml:lang="en">Limberis M., Anson D.S., Fuller M., Parsons D.W. Recovery of airway cystic fibrosis transmembrane conductance regulator function in mice with cystic fibrosis after single-dose lentivirus-mediated gene transfer. Hum Gene Ther. 2002 Nov 1;13(16):1961-70. doi: 10.1089/10430340260355365. Erratum in: Hum Gene Ther. 2002 Nov 20;13(17)2112.</mixed-citation></citation-alternatives></ref><ref id="cit23"><label>23</label><citation-alternatives><mixed-citation xml:lang="ru">Stocker A.G., Kremer K.L., Koldej R., et al. Single-dose lentiviral gene transfer for lifetime airway gene expression. J Gene Med. 2009 Oct;11(10):861-7. doi: 10.1002/jgm.1368.</mixed-citation><mixed-citation xml:lang="en">Stocker A.G., Kremer K.L., Koldej R., et al. Single-dose lentiviral gene transfer for lifetime airway gene expression. J Gene Med. 2009 Oct;11(10):861-7. doi: 10.1002/jgm.1368.</mixed-citation></citation-alternatives></ref><ref id="cit24"><label>24</label><citation-alternatives><mixed-citation xml:lang="ru">Farrow N., Cmielewski .P, Delhove J., et al. Towards Human Translation of Lentiviral Airway Gene Delivery for Cystic Fibrosis: A OneMonth CFTR and Reporter Gene Study in Marmosets. Hum Gene Ther. 2021 Aug;32(15-16):806-816. doi: 10.1089/hum.2020.267.</mixed-citation><mixed-citation xml:lang="en">Farrow N., Cmielewski .P, Delhove J., et al. Towards Human Translation of Lentiviral Airway Gene Delivery for Cystic Fibrosis: A One-Month CFTR and Reporter Gene Study in Marmosets. Hum Gene Ther. 2021 Aug;32(15-16):806-816. doi: 10.1089/hum.2020.267.</mixed-citation></citation-alternatives></ref><ref id="cit25"><label>25</label><citation-alternatives><mixed-citation xml:lang="ru">Reyne N., Cmielewski P., McCarron A., et al. Single-Dose Lentiviral Mediated Gene Therapy Recovers CFTR Function in Cystic Fibrosis Knockout Rats. Front Pharmacol. 2021 May 18;12:682299. doi: 10.3389/fphar.2021.682299.</mixed-citation><mixed-citation xml:lang="en">Reyne N., Cmielewski P., McCarron A., et al. Single-Dose Lentiviral Mediated Gene Therapy Recovers CFTR Function in Cystic Fibrosis Knockout Rats. Front Pharmacol. 2021 May 18;12:682299. doi: 10.3389/fphar.2021.682299.</mixed-citation></citation-alternatives></ref><ref id="cit26"><label>26</label><citation-alternatives><mixed-citation xml:lang="ru">Cooney A.L., Abou Alaiwa M.H., Shah V.S., et al. Lentiviral-mediated phenotypic correction of cystic fibrosis pigs. JCI Insight. 2016 Sep 8;1(14):e88730. doi: 10.1172/jci.insight.88730.</mixed-citation><mixed-citation xml:lang="en">Cooney A.L., Abou Alaiwa M.H., Shah V.S., et al. Lentiviral-mediated phenotypic correction of cystic fibrosis pigs. JCI Insight. 2016 Sep 8;1(14):e88730. doi: 10.1172/jci.insight.88730.</mixed-citation></citation-alternatives></ref><ref id="cit27"><label>27</label><citation-alternatives><mixed-citation xml:lang="ru">Cooney A.L., Singh B.K., Loza L.M., et al. Widespread airway distribution and short-term phenotypic correction of cystic fibrosis pigs following aerosol delivery of piggyBac/adenovirus. Nucleic Acids Res. 2018 Oct 12;46(18):9591-9600. doi: 10.1093/nar/gky773.</mixed-citation><mixed-citation xml:lang="en">Cooney A.L., Singh B.K., Loza L.M., et al. Widespread airway distribution and short-term phenotypic correction of cystic fibrosis pigs following aerosol delivery of piggyBac/adenovirus. Nucleic Acids Res. 2018 Oct 12;46(18):9591-9600. doi: 10.1093/nar/gky773.</mixed-citation></citation-alternatives></ref><ref id="cit28"><label>28</label><citation-alternatives><mixed-citation xml:lang="ru">Trimidal S. G., Benjamin R., Bae J. E., et al. Can Designer Indels Be Tailored by Gene Editing?. BioEssays 2019, 41, 1900126. https://doi.org/10.1002/bies.201900126</mixed-citation><mixed-citation xml:lang="en">Trimidal S. G., Benjamin R., Bae J. E., et al. Can Designer Indels Be Tailored by Gene Editing?. BioEssays 2019, 41, 1900126. https://doi.org/10.1002/bies.201900126</mixed-citation></citation-alternatives></ref><ref id="cit29"><label>29</label><citation-alternatives><mixed-citation xml:lang="ru">Kim Y.G., Cha J., Chandrasegaran S. Hybrid restriction enzymes: zinc finger fusions to Fok I cleavage domain. Proc Natl Acad Sci U S A. 1996 Feb 6;93(3):1156-1160.</mixed-citation><mixed-citation xml:lang="en">Kim Y.G., Cha J., Chandrasegaran S. Hybrid restriction enzymes: zinc finger fusions to Fok I cleavage domain. Proc Natl Acad Sci U S A. 1996 Feb 6;93(3):1156-1160.</mixed-citation></citation-alternatives></ref><ref id="cit30"><label>30</label><citation-alternatives><mixed-citation xml:lang="ru">Cermak T., Doyle E.L., Christian M., et al. Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting. Nucleic Acids Res. 2011 Jul;39(12):e82.</mixed-citation><mixed-citation xml:lang="en">Cermak T., Doyle E.L., Christian M., et al. Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting. Nucleic Acids Res. 2011 Jul;39(12):e82.</mixed-citation></citation-alternatives></ref><ref id="cit31"><label>31</label><citation-alternatives><mixed-citation xml:lang="ru">Jinek M., Chylinski K., Fonfara I., et al. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science. 2012 Aug 17;337(6096):816-821.</mixed-citation><mixed-citation xml:lang="en">Jinek M., Chylinski K., Fonfara I., et al. A programmable dual-RNAguided DNA endonuclease in adaptive bacterial immunity. Science. 2012 Aug 17;337(6096):816-821.</mixed-citation></citation-alternatives></ref><ref id="cit32"><label>32</label><citation-alternatives><mixed-citation xml:lang="ru">Mullard A. CRISPR pioneers win Nobel prize. Nat Rev Drug Discov. 2020 Dec;19(12):827. doi: 10.1038/d41573-020-00198-7.</mixed-citation><mixed-citation xml:lang="en">Mullard A. CRISPR pioneers win Nobel prize. Nat Rev Drug Discov. 2020 Dec;19(12):827. doi: 10.1038/d41573-020-00198-7.</mixed-citation></citation-alternatives></ref><ref id="cit33"><label>33</label><citation-alternatives><mixed-citation xml:lang="ru">ClinicalTrials.gov. National Library of Medicine, 8600 Rockville Pike, Bethesda, MD 20894, https://clinicaltrials.gov (дата доступа 18.01.2024 г.)</mixed-citation><mixed-citation xml:lang="en">ClinicalTrials.gov. National Library of Medicine, 8600 Rockville Pike, Bethesda, MD 20894, https://clinicaltrials.gov (Access date: 18.01.2024 г.)</mixed-citation></citation-alternatives></ref><ref id="cit34"><label>34</label><citation-alternatives><mixed-citation xml:lang="ru">Gaudelli N.M., Komor A.C., Rees H.A., et al. Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage. Nature. 2017 Nov 23;551(7681):464-471. doi: 10.1038/nature24644. Erratum in: Nature. 2018 May 2.</mixed-citation><mixed-citation xml:lang="en">Gaudelli N.M., Komor A.C., Rees H.A., et al. Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage. Nature. 2017 Nov 23;551(7681):464-471. doi: 10.1038/nature24644. Erratum in: Nature. 2018 May 2.</mixed-citation></citation-alternatives></ref><ref id="cit35"><label>35</label><citation-alternatives><mixed-citation xml:lang="ru">Rees H.A., Liu D.R. Base editing: precision chemistry on the genome and transcriptome of living cells [published correction appears in Nat Rev Genet. 2018 Oct 19;:]. Nat Rev Genet. 2018;19(12):770- 788. doi:10.1038/s41576-018-0059-1</mixed-citation><mixed-citation xml:lang="en">Rees H.A., Liu D.R. Base editing: precision chemistry on the genome and transcriptome of living cells [published correction appears in Nat Rev Genet. 2018 Oct 19;:]. Nat Rev Genet. 2018;19(12):770-788. doi:10.1038/s41576-018-0059-1</mixed-citation></citation-alternatives></ref><ref id="cit36"><label>36</label><citation-alternatives><mixed-citation xml:lang="ru">Geurts M.H., de Poel E., Amatngalim G.D., et al. CRISPR-Based Adenine Editors Correct Nonsense Mutations in a Cystic Fibrosis Organoid Biobank. Cell Stem Cell. 2020 Apr 2;26(4):503-510.e7. doi: 10.1016/j.stem.2020.01.019. Epub 2020 Feb 20. PMID: 32084388.</mixed-citation><mixed-citation xml:lang="en">Geurts M.H., de Poel E., Amatngalim G.D., et al. CRISPR-Based Adenine Editors Correct Nonsense Mutations in a Cystic Fibrosis Organoid Biobank. Cell Stem Cell. 2020 Apr 2;26(4):503-510.e7. doi: 10.1016/j.stem.2020.01.019. Epub 2020 Feb 20. PMID: 32084388.</mixed-citation></citation-alternatives></ref><ref id="cit37"><label>37</label><citation-alternatives><mixed-citation xml:lang="ru">Philippidis A. CASGEVY Makes History as FDA Approves First CRISPR/Cas9 Genome Edited Therapy. Hum Gene Ther. 2024 Jan;35(1-2):1-4. doi: 10.1089/hum.2023.29263.bfs.</mixed-citation><mixed-citation xml:lang="en">Philippidis A. CASGEVY Makes History as FDA Approves First CRISPR/Cas9 Genome Edited Therapy. Hum Gene Ther. 2024 Jan;35(1-2):1-4. doi: 10.1089/hum.2023.29263.bfs.</mixed-citation></citation-alternatives></ref><ref id="cit38"><label>38</label><citation-alternatives><mixed-citation xml:lang="ru">Gillmore J.D., Gane E., Taubel J., et al. CRISPR-Cas9 In Vivo Gene Editing for Transthyretin Amyloidosis. N Engl J Med. 2021 Aug 5;385(6):493-502. doi: 10.1056/NEJMoa2107454.</mixed-citation><mixed-citation xml:lang="en">Gillmore J.D., Gane E., Taubel J., et al. CRISPR-Cas9 In Vivo Gene Editing for Transthyretin Amyloidosis. N Engl J Med. 2021 Aug 5;385(6):493-502. doi: 10.1056/NEJMoa2107454.</mixed-citation></citation-alternatives></ref><ref id="cit39"><label>39</label><citation-alternatives><mixed-citation xml:lang="ru">Suzuki S., Chosa K., Barillà C., et al. Seamless Gene Correction in the Human Cystic Fibrosis Transmembrane Conductance Regulator Locus by Vector Replacement and Vector Insertion Events. Front Genome Ed. 2022 Apr 6;4:843885. doi: 10.3389/fgeed.2022.843885.</mixed-citation><mixed-citation xml:lang="en">Suzuki S., Chosa K., Barillà C., et al. Seamless Gene Correction in the Human Cystic Fibrosis Transmembrane Conductance Regulator Locus by Vector Replacement and Vector Insertion Events. Front Genome Ed. 2022 Apr 6;4:843885. doi: 10.3389/fgeed.2022.843885.</mixed-citation></citation-alternatives></ref><ref id="cit40"><label>40</label><citation-alternatives><mixed-citation xml:lang="ru">Cuevas-Ocaña S., Yang J.Y., Aushev M., et al. A Cell-Based Optimised Approach for Rapid and Efficient Gene Editing of Human Pluripotent Stem Cells. Int J Mol Sci. 2023 Jun 17;24(12):10266. doi: 10.3390/ijms241210266.</mixed-citation><mixed-citation xml:lang="en">Cuevas-Ocaña S., Yang J.Y., Aushev M., et al. A Cell-Based Optimised Approach for Rapid and Efficient Gene Editing of Human Pluripotent Stem Cells. Int J Mol Sci. 2023 Jun 17;24(12):10266. doi: 10.3390/ijms241210266.</mixed-citation></citation-alternatives></ref><ref id="cit41"><label>41</label><citation-alternatives><mixed-citation xml:lang="ru">Krishnamurthy S., Traore S., Cooney A.L., et al. Functional correction of CFTR mutations in human airway epithelial cells using adenine base editors. Nucleic Acids Res. 2021 Oct 11;49(18):10558- 10572. doi: 10.1093/nar/gkab788.</mixed-citation><mixed-citation xml:lang="en">Krishnamurthy S., Traore S., Cooney A.L., et al. Functional correction of CFTR mutations in human airway epithelial cells using adenine base editors. Nucleic Acids Res. 2021 Oct 11;49(18):10558-10572. doi: 10.1093/nar/gkab788.</mixed-citation></citation-alternatives></ref><ref id="cit42"><label>42</label><citation-alternatives><mixed-citation xml:lang="ru">Bednarski C., Tomczak K., Vom Hövel B., et al. Targeted Integration of a Super-Exon into the CFTR Locus Leads to Functional Correction of a Cystic Fibrosis Cell Line Model. PLoS One 2016; 11(8): e0161072.</mixed-citation><mixed-citation xml:lang="en">Bednarski C., Tomczak K., Vom Hövel B., et al. Targeted Integration of a Super-Exon into the CFTR Locus Leads to Functional Correction of a Cystic Fibrosis Cell Line Model. PLoS One 2016; 11(8): e0161072.</mixed-citation></citation-alternatives></ref><ref id="cit43"><label>43</label><citation-alternatives><mixed-citation xml:lang="ru">Vaidyanathan S., Salahudeen A.A., Sellers Z.M., et al. High-Efficiency, Selection-free Gene Repair in Airway Stem Cells from Cystic Fibrosis Patients Rescues CFTR Function in Differentiated Epithelia. Cell Stem Cell. 2020 Feb 6;26(2):161-171.e4. doi: 10.1016/j.stem.2019.11.002.</mixed-citation><mixed-citation xml:lang="en">Vaidyanathan S., Salahudeen A.A., Sellers Z.M., et al. High-Efficiency, Selection-free Gene Repair in Airway Stem Cells from Cystic Fibrosis Patients Rescues CFTR Function in Differentiated Epithelia. Cell Stem Cell. 2020 Feb 6;26(2):161-171.e4. doi: 10.1016/j.stem.2019.11.002.</mixed-citation></citation-alternatives></ref><ref id="cit44"><label>44</label><citation-alternatives><mixed-citation xml:lang="ru">Wei T., Sun Y., Cheng Q., et al. Lung SORT LNPs enable precise homology-directed repair mediated CRISPR/Cas genome correction in cystic fibrosis models. Nat Commun. 2023 Nov 11;14(1):7322. doi: 10.1038/s41467-023-42948-2.</mixed-citation><mixed-citation xml:lang="en">Wei T., Sun Y., Cheng Q., et al. Lung SORT LNPs enable precise homology-directed repair mediated CRISPR/Cas genome correction in cystic fibrosis models. Nat Commun. 2023 Nov 11;14(1):7322. doi: 10.1038/s41467-023-42948-2.</mixed-citation></citation-alternatives></ref><ref id="cit45"><label>45</label><citation-alternatives><mixed-citation xml:lang="ru">Mention K., Cavusoglu-Doran K., Joynt A.T., et al. Use of adenine base editing and homology-independent targeted integration strategies to correct the cystic fibrosis causing variant, W1282X. Hum Mol Genet. 2023 Nov 17;32(23):3237-3248. doi: 10.1093/hmg/ddad143.</mixed-citation><mixed-citation xml:lang="en">Mention K., Cavusoglu-Doran K., Joynt A.T., et al. Use of adenine base editing and homology-independent targeted integration strategies to correct the cystic fibrosis causing variant, W1282X. Hum Mol Genet. 2023 Nov 17;32(23):3237-3248. doi: 10.1093/hmg/ddad143.</mixed-citation></citation-alternatives></ref><ref id="cit46"><label>46</label><citation-alternatives><mixed-citation xml:lang="ru">Dekkers J.F,. Wiegerinck C.L., de Jonge H.R., et al. A functional CFTR assay using primary cystic fibrosis intestinal organoids. Nat Med. 2013 Jul;19(7):939-45. doi: 10.1038/nm.3201.</mixed-citation><mixed-citation xml:lang="en">Dekkers J.F,. Wiegerinck C.L., de Jonge H.R., et al. A functional CFTR assay using primary cystic fibrosis intestinal organoids. Nat Med. 2013 Jul;19(7):939-45. doi: 10.1038/nm.3201.</mixed-citation></citation-alternatives></ref><ref id="cit47"><label>47</label><citation-alternatives><mixed-citation xml:lang="ru">Sato T., Clevers H. Growing self-organizing mini-guts from a single intestinal stem cell: mechanism and applications. Science. 2013 Jun 7;340(6137):1190-4. doi: 10.1126/science.1234852.</mixed-citation><mixed-citation xml:lang="en">Sato T., Clevers H. Growing self-organizing mini-guts from a single intestinal stem cell: mechanism and applications. Science. 2013 Jun 7;340(6137):1190-4. doi: 10.1126/science.1234852.</mixed-citation></citation-alternatives></ref><ref id="cit48"><label>48</label><citation-alternatives><mixed-citation xml:lang="ru">Miller A.J., Hill D.R., Nagy M.S., et al. In Vitro Induction and In Vivo Engraftment of Lung Bud Tip Progenitor Cells Derived from Human Pluripotent Stem Cells. Stem Cell Reports. 2018 Jan 9;10(1):101-119. doi: 10.1016/j.stemcr.2017.11.012.</mixed-citation><mixed-citation xml:lang="en">Miller A.J., Hill D.R., Nagy M.S., et al. In Vitro Induction and In Vivo Engraftment of Lung Bud Tip Progenitor Cells Derived from Human Pluripotent Stem Cells. Stem Cell Reports. 2018 Jan 9;10(1):101-119. doi: 10.1016/j.stemcr.2017.11.012.</mixed-citation></citation-alternatives></ref><ref id="cit49"><label>49</label><citation-alternatives><mixed-citation xml:lang="ru">Demchenko A., Kondrateva E., Tabakov V., et al. Airway and Lung Organoids from Human-Induced Pluripotent Stem Cells Can Be Used to Assess CFTR Conductance. Int. J. Mol. Sci. 2023, 24, 6293. https://doi.org/10.3390/ijms24076293.</mixed-citation><mixed-citation xml:lang="en">Demchenko A., Kondrateva E., Tabakov V., et al. Airway and Lung Organoids from Human-Induced Pluripotent Stem Cells Can Be Used to Assess CFTR Conductance. Int. J. Mol. Sci. 2023, 24, 6293. https:// doi.org/10.3390/ijms24076293.</mixed-citation></citation-alternatives></ref><ref id="cit50"><label>50</label><citation-alternatives><mixed-citation xml:lang="ru">Miller A.J., Dye B.R., Ferrer-Torres D., et al. Generation of lung organoids from human pluripotent stem cells in vitro. Nat Protoc. 2019 Feb;14(2):518-540. doi: 10.1038/s41596-018-0104-8.</mixed-citation><mixed-citation xml:lang="en">Miller A.J., Dye B.R., Ferrer-Torres D., et al. Generation of lung organoids from human pluripotent stem cells in vitro. Nat Protoc. 2019 Feb;14(2):518-540. doi: 10.1038/s41596-018-0104-8.</mixed-citation></citation-alternatives></ref><ref id="cit51"><label>51</label><citation-alternatives><mixed-citation xml:lang="ru">Parekh K.R., Nawroth J., Pai A., et al. Stem cells and lung regeneration. Am J Physiol Cell Physiol. 2020 Oct 1;319(4):C675-C693. doi: 10.1152/ajpcell.00036.2020.</mixed-citation><mixed-citation xml:lang="en">Parekh K.R., Nawroth J., Pai A., et al. Stem cells and lung regeneration. Am J Physiol Cell Physiol. 2020 Oct 1;319(4):C675-C693. doi: 10.1152/ajpcell.00036.2020.</mixed-citation></citation-alternatives></ref><ref id="cit52"><label>52</label><citation-alternatives><mixed-citation xml:lang="ru">Della Latta V., Cecchettini A., Del Ry S., Morales M.A. Bleomycin in the setting of lung fibrosis induction: From biological mechanisms to counteractions. Pharmacol Res. 2015 Jul;97:122-30. doi: 10.1016/j.phrs.2015.04.012.</mixed-citation><mixed-citation xml:lang="en">Della Latta V., Cecchettini A., Del Ry S., Morales M.A. Bleomycin in the setting of lung fibrosis induction: From biological mechanisms to counteractions. Pharmacol Res. 2015 Jul;97:122-30. doi: 10.1016/j.phrs.2015.04.012.</mixed-citation></citation-alternatives></ref><ref id="cit53"><label>53</label><citation-alternatives><mixed-citation xml:lang="ru">Rosen C., Shezen E., Aronovich A., et al. Preconditioning allows engraftment of mouse and human embryonic lung cells, enabling lung repair in mice. Nat Med. 2015 Aug;21(8):869-79. doi: 10.1038/nm.3889.</mixed-citation><mixed-citation xml:lang="en">Rosen C., Shezen E., Aronovich A., et al. Preconditioning allows engraftment of mouse and human embryonic lung cells, enabling lung repair in mice. Nat Med. 2015 Aug;21(8):869-79. doi: 10.1038/nm.3889.</mixed-citation></citation-alternatives></ref><ref id="cit54"><label>54</label><citation-alternatives><mixed-citation xml:lang="ru">Loi R., Beckett T., Goncz K.K., Suratt B.T., Weiss D.J. Limited restoration of cystic fibrosis lung epithelium in vivo with adult bone marrow-derived cells. Am J Respir Crit Care Med. 2006 Jan 15;173(2):171-9. doi: 10.1164/rccm.200502-309OC.</mixed-citation><mixed-citation xml:lang="en">Loi R., Beckett T., Goncz K.K., Suratt B.T., Weiss D.J. Limited restoration of cystic fibrosis lung epithelium in vivo with adult bone marrow-derived cells. Am J Respir Crit Care Med. 2006 Jan 15;173(2):171-9. doi: 10.1164/rccm.200502-309OC.</mixed-citation></citation-alternatives></ref><ref id="cit55"><label>55</label><citation-alternatives><mixed-citation xml:lang="ru">Gutierrez-Aranda I., Ramos-Mejia V., Bueno C., et al. Human induced pluripotent stem cells develop teratoma more efficiently and faster than human embryonic stem cells regardless the site of injection. Stem Cells. 2010 Sep;28(9):1568-70. doi: 10.1002/stem.471.</mixed-citation><mixed-citation xml:lang="en">Gutierrez-Aranda I., Ramos-Mejia V., Bueno C., et al. Human induced pluripotent stem cells develop teratoma more efficiently and faster than human embryonic stem cells regardless the site of injection. Stem Cells. 2010 Sep;28(9):1568-70. doi: 10.1002/stem.471.</mixed-citation></citation-alternatives></ref><ref id="cit56"><label>56</label><citation-alternatives><mixed-citation xml:lang="ru">Liu Z., Tang Y., Lü S., et al. The tumourigenicity of iPS cells and their differentiated derivates. J Cell Mol Med. 2013 Jun;17(6):782-91. doi: 10.1111/jcmm.12062.</mixed-citation><mixed-citation xml:lang="en">Liu Z., Tang Y., Lü S., et al. The tumourigenicity of iPS cells and their differentiated derivates. J Cell Mol Med. 2013 Jun;17(6):782-91. doi: 10.1111/jcmm.12062.</mixed-citation></citation-alternatives></ref><ref id="cit57"><label>57</label><citation-alternatives><mixed-citation xml:lang="ru">Lee C.M., Flynn R., Hollywood J.A., et al. Correction of the ΔF508 Mutation in the Cystic Fibrosis Transmembrane Conductance Regulator Gene by Zinc-Finger Nuclease Homology-Directed Repair. Biores. Open Access. 2012; 1(3): 99-108.</mixed-citation><mixed-citation xml:lang="en">Lee C.M., Flynn R., Hollywood J.A., et al. Correction of the ΔF508 Mutation in the Cystic Fibrosis Transmembrane Conductance Regulator Gene by Zinc-Finger Nuclease Homology-Directed Repair. Biores. Open Access. 2012; 1(3): 99-108.</mixed-citation></citation-alternatives></ref><ref id="cit58"><label>58</label><citation-alternatives><mixed-citation xml:lang="ru">Schwank G., Koo B.K., Sasselli V., et al. Functional repair of CFTR by CRISPR/Cas9 in intestinal stem cell organoids of cystic fibrosis patients. Cell Stem Cell 2013; 13(6): 653-8.</mixed-citation><mixed-citation xml:lang="en">Schwank G., Koo B.K., Sasselli V., et al. Functional repair of CFTR by CRISPR/Cas9 in intestinal stem cell organoids of cystic fibrosis patients. Cell Stem Cell 2013; 13(6): 653-8.</mixed-citation></citation-alternatives></ref><ref id="cit59"><label>59</label><citation-alternatives><mixed-citation xml:lang="ru">Firth A.L., Menon T., Parker G.S., et al. Functional Gene Correction for Cystic Fibrosis in Lung Epithelial Cells Generated from Patient iPSCs. Cell Rep. 2015; 12(9): 1385-90.</mixed-citation><mixed-citation xml:lang="en">Firth A.L., Menon T., Parker G.S., et al. Functional Gene Correction for Cystic Fibrosis in Lung Epithelial Cells Generated from Patient iPSCs. Cell Rep. 2015; 12(9): 1385-90.</mixed-citation></citation-alternatives></ref><ref id="cit60"><label>60</label><citation-alternatives><mixed-citation xml:lang="ru">Crane A.M., Kramer P., Bui J.H., et al. Targeted correction and restored function of the CFTR gene in cystic fibrosis induced pluripotent stem cells. Stem Cell Reports 2015; 4(4): 569-77.</mixed-citation><mixed-citation xml:lang="en">Crane A.M., Kramer P., Bui J.H., et al. Targeted correction and restored function of the CFTR gene in cystic fibrosis induced pluripotent stem cells. Stem Cell Reports 2015; 4(4): 569-77.</mixed-citation></citation-alternatives></ref><ref id="cit61"><label>61</label><citation-alternatives><mixed-citation xml:lang="ru">Hollywood J.A., Lee C.M., Scallan M.F., et al. Analysis of gene repair tracts from Cas9/gRNA double-stranded breaks in the human CFTR gene. Sci. Rep. 2016; 6: 32230.</mixed-citation><mixed-citation xml:lang="en">Hollywood J.A., Lee C.M., Scallan M.F., et al. Analysis of gene repair tracts from Cas9/gRNA double-stranded breaks in the human CFTR gene. Sci. Rep. 2016; 6: 32230</mixed-citation></citation-alternatives></ref><ref id="cit62"><label>62</label><citation-alternatives><mixed-citation xml:lang="ru">Suzuki S., Sargent R.G., Illek B., et al. TALENs Facilitate Single-step Seamless SDF Correction of F508del CFTR in Airway Epithelial Submucosal Gland Cell-derived CF-iPSCs. Mol. Ther. Nucleic Acids. 2016; 5: e273.</mixed-citation><mixed-citation xml:lang="en">Suzuki S., Sargent R.G., Illek B., et al. TALENs Facilitate Singlestep Seamless SDF Correction of F508del CFTR in Airway Epithelial Submucosal Gland Cell-derived CF-iPSCs. Mol. Ther. Nucleic Acids. 2016; 5: e273.</mixed-citation></citation-alternatives></ref><ref id="cit63"><label>63</label><citation-alternatives><mixed-citation xml:lang="ru">Merkert S., Bednarski C., Göhring G., et al. Generation of a gene-corrected isogenic control iPSC line from cystic fibrosis patient-specific iPSCs homozygous for p.Phe508del mutation mediated by TALENs and ssODN. Stem Cell Res. 2017; 23: 95-7.</mixed-citation><mixed-citation xml:lang="en">Merkert S., Bednarski C., Göhring G., et al. Generation of a gene-corrected isogenic control iPSC line from cystic fibrosis patient-specific iPSCs homozygous for p.Phe508del mutation mediated by TALENs and ssODN. Stem Cell Res. 2017; 23: 95-7.</mixed-citation></citation-alternatives></ref><ref id="cit64"><label>64</label><citation-alternatives><mixed-citation xml:lang="ru">Peters-Hall J.R., Coquelin M.L., Torres M.J., et al. Long-term culture and cloning of primary human bronchial basal cells that maintain multipotent differentiation capacity and CFTR channel function. Am J Physiol Lung Cell Mol Physiol. 2018 Aug 1;315(2):L313-L327. doi: 10.1152/ajplung.00355.2017.</mixed-citation><mixed-citation xml:lang="en">Peters-Hall J.R., Coquelin M.L., Torres M.J., et al. Long-term culture and cloning of primary human bronchial basal cells that maintain multipotent differentiation capacity and CFTR channel function. Am J Physiol Lung Cell Mol Physiol. 2018 Aug 1;315(2):L313-L327. doi: 10.1152/ajplung.00355.2017.</mixed-citation></citation-alternatives></ref><ref id="cit65"><label>65</label><citation-alternatives><mixed-citation xml:lang="ru">Suzuki S., Crane A.M., Anirudhan V., et al. Highly Efficient Gene Editing of Cystic Fibrosis Patient-Derived Airway Basal Cells Results in Functional CFTR Correction. Mol Ther. 2020 Jul 8;28(7):1684-1695. doi: 10.1016/j.ymthe.2020.04.021.</mixed-citation><mixed-citation xml:lang="en">Suzuki S., Crane A.M., Anirudhan V., et al. Highly Efficient Gene Editing of Cystic Fibrosis Patient-Derived Airway Basal Cells Results in Functional CFTR Correction. Mol Ther. 2020 Jul 8;28(7):1684- 1695. doi: 10.1016/j.ymthe.2020.04.021.</mixed-citation></citation-alternatives></ref><ref id="cit66"><label>66</label><citation-alternatives><mixed-citation xml:lang="ru">Fleischer A., Vallejo-Díez S., Martín-Fernández J.M., et al. iPSC-Derived Intestinal Organoids from Cystic Fibrosis Patients Acquire CFTR Activity upon TALEN-Mediated Repair of the p.F508del Mutation. Mol Ther Methods Clin Dev. 2020 Apr 18;17:858-870. doi: 10.1016/j.omtm.2020.04.005.</mixed-citation><mixed-citation xml:lang="en">Fleischer A., Vallejo-Díez S., Martín-Fernández J.M., et al. iPSC-Derived Intestinal Organoids from Cystic Fibrosis Patients Acquire CFTR Activity upon TALEN-Mediated Repair of the p.F508del Mutation. Mol Ther Methods Clin Dev. 2020 Apr 18;17:858-870. doi: 10.1016/j.omtm.2020.04.005.</mixed-citation></citation-alternatives></ref><ref id="cit67"><label>67</label><citation-alternatives><mixed-citation xml:lang="ru">Palmer D.J., Turner D.L., Ng P. A Single “All-in-One” Helper-Dependent Adenovirus to Deliver Donor DNA and CRISPR/Cas9 for Efficient Homology-Directed Repair. Mol Ther Methods Clin Dev. 2020 Feb 4;17:441-447. doi: 10.1016/j.omtm.2020.01.014.</mixed-citation><mixed-citation xml:lang="en">Palmer D.J., Turner D.L., Ng P. A Single “All-in-One” Helper-Dependent Adenovirus to Deliver Donor DNA and CRISPR/Cas9 for Efficient Homology-Directed Repair. Mol Ther Methods Clin Dev. 2020 Feb 4;17:441-447. doi: 10.1016/j.omtm.2020.01.014.</mixed-citation></citation-alternatives></ref><ref id="cit68"><label>68</label><citation-alternatives><mixed-citation xml:lang="ru">Geurts M.H., de Poel E., Pleguezuelos-Manzano C., et al. Evaluating CRISPR-based prime editing for cancer modeling and CFTR repair in organoids. Life Sci Alliance. 2021 Aug 9;4(10):e202000940. doi: 10.26508/lsa.202000940.</mixed-citation><mixed-citation xml:lang="en">Geurts M.H., de Poel E., Pleguezuelos-Manzano C., et al. Evaluating CRISPR-based prime editing for cancer modeling and CFTR repair in organoids. Life Sci Alliance. 2021 Aug 9;4(10):e202000940. doi: 10.26508/lsa.202000940.</mixed-citation></citation-alternatives></ref><ref id="cit69"><label>69</label><citation-alternatives><mixed-citation xml:lang="ru">Ruan J., Hirai H., Yang D., et al. Efficient Gene Editing at Major CFTR Mutation Loci. Mol Ther Nucleic Acids. 2019 Jun 7;16:73- 81. doi: 10.1016/j.omtn.2019.02.006.</mixed-citation><mixed-citation xml:lang="en">Ruan J., Hirai H., Yang D., et al. Efficient Gene Editing at Major CFTR Mutation Loci. Mol Ther Nucleic Acids. 2019 Jun 7;16:73-81. doi: 10.1016/j.omtn.2019.02.006.</mixed-citation></citation-alternatives></ref><ref id="cit70"><label>70</label><citation-alternatives><mixed-citation xml:lang="ru">Bulcaen M., Kortleven P., Liu R.B., et al. Prime editing functionally corrects cystic fibrosis-causing CFTR mutations in human organoids and airway epithelial cells. Cell Rep Med. 2024 May 21;5(5):101544. doi: 10.1016/j.xcrm.2024.101544.</mixed-citation><mixed-citation xml:lang="en">Bulcaen M., Kortleven P., Liu R.B., et al. Prime editing functionally corrects cystic fibrosis-causing CFTR mutations in human organoids and airway epithelial cells. Cell Rep Med. 2024 May 21;5(5):101544. doi: 10.1016/j.xcrm.2024.101544.</mixed-citation></citation-alternatives></ref><ref id="cit71"><label>71</label><citation-alternatives><mixed-citation xml:lang="ru">Sanz D.J., Hollywood J.A., Scallan M.F., et al. Cas9/gRNA targeted excision of cystic fibrosis-causing deep-intronic splicing mutations restores normal splicing of CFTR mRNA. PLoS One 2017; 12(9): e0184009.</mixed-citation><mixed-citation xml:lang="en">Sanz D.J., Hollywood J.A., Scallan M.F., et al. Cas9/gRNA targeted excision of cystic fibrosis-causing deep-intronic splicing mutations restores normal splicing of CFTR mRNA. PLoS One 2017; 12(9): e0184009.</mixed-citation></citation-alternatives></ref><ref id="cit72"><label>72</label><citation-alternatives><mixed-citation xml:lang="ru">Maule G., Casini A., Montagna C., et al. Allele specific repair of splicing mutations in cystic fibrosis through AsCas12a genome editing. Nat Commun. 2019 Aug 7;10(1):3556. doi: 10.1038/s41467-019-11454-9.</mixed-citation><mixed-citation xml:lang="en">Maule G., Casini A., Montagna C., et al. Allele specific repair of splicing mutations in cystic fibrosis through AsCas12a genome editing. Nat Commun. 2019 Aug 7;10(1):3556. doi: 10.1038/s41467-019-11454-9.</mixed-citation></citation-alternatives></ref><ref id="cit73"><label>73</label><citation-alternatives><mixed-citation xml:lang="ru">Sanz D.J., Harrison P.T. Minigene assay to Evaluate CRISPR/Cas9- based excision of Intronic mutations that Cause Aberrant Splicing in Human Cells. Bio Protoc. 2019 Jun 5;9(11):e3251. doi: 10.21769/BioProtoc.3251.</mixed-citation><mixed-citation xml:lang="en">Sanz D.J., Harrison P.T. Minigene assay to Evaluate CRISPR/Cas9- based excision of Intronic mutations that Cause Aberrant Splicing in Human Cells. Bio Protoc. 2019 Jun 5;9(11):e3251. doi: 10.21769/BioProtoc.3251.</mixed-citation></citation-alternatives></ref><ref id="cit74"><label>74</label><citation-alternatives><mixed-citation xml:lang="ru">Melfi R., Cancemi P., Chiavetta R., et al. Investigating REPAIRv2 as a Tool to Edit CFTR mRNA with Premature Stop Codons. Int J Mol Sci. 2020 Jul 6;21(13):4781. doi: 10.3390/ijms21134781.</mixed-citation><mixed-citation xml:lang="en">Melfi R., Cancemi P., Chiavetta R., et al. Investigating REPAIRv2 as a Tool to Edit CFTR mRNA with Premature Stop Codons. Int J Mol Sci. 2020 Jul 6;21(13):4781. doi: 10.3390/ijms21134781.</mixed-citation></citation-alternatives></ref><ref id="cit75"><label>75</label><citation-alternatives><mixed-citation xml:lang="ru">Erwood S., Laselva O., Bily T.M.I., et al. Allele-Specific Prevention of Nonsense-Mediated Decay in Cystic Fibrosis Using Homology-Independent Genome Editing. Mol Ther Methods Clin Dev. 2020 May 12;17:1118-1128. doi: 10.1016/j.omtm.2020.05.002.</mixed-citation><mixed-citation xml:lang="en">Erwood S., Laselva O., Bily T.M.I., et al. Allele-Specific Prevention of Nonsense-Mediated Decay in Cystic Fibrosis Using Homology-Independent Genome Editing. Mol Ther Methods Clin Dev. 2020 May 12;17:1118-1128. doi: 10.1016/j.omtm.2020.05.002.</mixed-citation></citation-alternatives></ref><ref id="cit76"><label>76</label><citation-alternatives><mixed-citation xml:lang="ru">Santos L., Mention K., Cavusoglu-Doran K., et al. Comparison of Cas9 and Cas12a CRISPR editing methods to correct the W1282X-CFTR mutation. J Cyst Fibros. 2021 Jun 5:S1569- 1993(21)00167-3. doi: 10.1016/j.jcf.2021.05.014.</mixed-citation><mixed-citation xml:lang="en">Santos L., Mention K., Cavusoglu-Doran K., et al. Comparison of Cas9 and Cas12a CRISPR editing methods to correct the W1282X-CFTR mutation. J Cyst Fibros. 2021 Jun 5:S1569-1993(21)00167-3. doi: 10.1016/j.jcf.2021.05.014.</mixed-citation></citation-alternatives></ref><ref id="cit77"><label>77</label><citation-alternatives><mixed-citation xml:lang="ru">Chiavetta R.F., Titoli S., Barra V., et al. Site-Specific RNA Editing of Stop Mutations in the CFTR mRNA of Human Bronchial Cultured Cells. Int J Mol Sci. 2023 Jun 30;24(13):10940. doi: 10.3390/ijms241310940.</mixed-citation><mixed-citation xml:lang="en">Chiavetta R.F., Titoli S., Barra V., et al. Site-Specific RNA Editing of Stop Mutations in the CFTR mRNA of Human Bronchial Cultured Cells. Int J Mol Sci. 2023 Jun 30;24(13):10940. doi: 10.3390/ijms241310940.</mixed-citation></citation-alternatives></ref><ref id="cit78"><label>78</label><citation-alternatives><mixed-citation xml:lang="ru">Li C., Liu Z., Anderson J., et al. Prime editing-mediated correction of the CFTR W1282X mutation in iPSCs and derived airway epithelial cells. PLoS One. 2023 Nov 29;18(11):e0295009. doi: 10.1371/journal.pone.0295009.</mixed-citation><mixed-citation xml:lang="en">Li C., Liu Z., Anderson J., et al. Prime editing-mediated correction of the CFTR W1282X mutation in iPSCs and derived airway epithelial cells. PLoS One. 2023 Nov 29;18(11):e0295009. doi: 10.1371/journal.pone.0295009.</mixed-citation></citation-alternatives></ref><ref id="cit79"><label>79</label><citation-alternatives><mixed-citation xml:lang="ru">Amistadi S., Maule G., Ciciani M., et al. Functional restoration of a CFTR splicing mutation through RNA delivery of CRISPR adenine base editor. Mol Ther. 2023 Jun 7;31(6):1647-1660. doi: 10.1016/j.ymthe.2023.03.004.</mixed-citation><mixed-citation xml:lang="en">Amistadi S., Maule G., Ciciani M., et al. Functional restoration of a CFTR splicing mutation through RNA delivery of CRISPR adenine base editor. Mol Ther. 2023 Jun 7;31(6):1647-1660. doi: 10.1016/j.ymthe.2023.03.004.</mixed-citation></citation-alternatives></ref><ref id="cit80"><label>80</label><citation-alternatives><mixed-citation xml:lang="ru">Walker A.J., Graham C., Greenwood M., et al. Molecular and functional correction of a deep intronic splicing mutation in CFTR by CRISPR-Cas9 gene editing. Mol Ther Methods Clin Dev. 2023 Oct 18;31:101140. doi: 10.1016/j.omtm.2023.101140.</mixed-citation><mixed-citation xml:lang="en">Walker A.J., Graham C., Greenwood M., et al. Molecular and functional correction of a deep intronic splicing mutation in CFTR by CRISPR-Cas9 gene editing. Mol Ther Methods Clin Dev. 2023 Oct 18;31:101140. doi: 10.1016/j.omtm.2023.101140.</mixed-citation></citation-alternatives></ref><ref id="cit81"><label>81</label><citation-alternatives><mixed-citation xml:lang="ru">Joynt A.T., Kavanagh E.W., Newby G.A., et al. Protospacer modification improves base editing of a canonical splice site variant and recovery of CFTR function in human airway epithelial cells. Mol Ther Nucleic Acids. 2023 Jun 29;33:335-350. doi: 10.1016/j.omtn.2023.06.020.</mixed-citation><mixed-citation xml:lang="en">Joynt A.T., Kavanagh E.W., Newby G.A., et al. Protospacer modification improves base editing of a canonical splice site variant and recovery of CFTR function in human airway epithelial cells. Mol Ther Nucleic Acids. 2023 Jun 29;33:335-350. doi: 10.1016/j.omtn.2023.06.020.</mixed-citation></citation-alternatives></ref><ref id="cit82"><label>82</label><citation-alternatives><mixed-citation xml:lang="ru">Кондратьева Е.В., Демченко А.Г., Лавров А.В., Смирнихина С.А. Редактирование мутации c.3846G&gt;A (p.Trp1282*) в гене CFTR в ИПСК с использованием аденинового редактора. Медицинская генетика. 2023; 22(11): 20-26. Doi: 10.25557/2073-7998.2023.11.20-26</mixed-citation><mixed-citation xml:lang="en">Kondrateva E.V., Demchenko A.G., Lavrov A.V., Smirnikhina S.A. Redaktirovaniye mutatsii c.3846G&gt;A (p.Trp1282*) v gene CFTR v IPSK s ispol’zovaniyem adeninovogo redaktora [Editing the c.3846G&gt;A (p.Trp1282*) mutation in the CFTR gene in iPSCs using adenine editor]. Meditsinskaya genetika [Medical Genetics]. 2023;22(11):20-26. (In Russ.) https://doi.org/10.25557/2073-7998.2023.11.20-26</mixed-citation></citation-alternatives></ref><ref id="cit83"><label>83</label><citation-alternatives><mixed-citation xml:lang="ru">Kulhankova K., Traore S., Cheng X., et al. Shuttle peptide delivers base editor RNPs to rhesus monkey airway epithelial cells in vivo. Nat Commun. 2023 Dec 5;14(1):8051. doi: 10.1038/s41467-023-43904-w.</mixed-citation><mixed-citation xml:lang="en">Kulhankova K., Traore S., Cheng X., et al. Shuttle peptide delivers base editor RNPs to rhesus monkey airway epithelial cells in vivo. Nat Commun. 2023 Dec 5;14(1):8051. doi: 10.1038/s41467-023-43904-w.</mixed-citation></citation-alternatives></ref><ref id="cit84"><label>84</label><citation-alternatives><mixed-citation xml:lang="ru">Cystic Fibrosis Foundation Patient Registry 2021 Annual Data Report, Bethesda, Maryland, Cystic Fibrosis Foundation. https://www.cff.org/medical-professionals/patient-registry. Дата доступа: 22.01.2024</mixed-citation><mixed-citation xml:lang="en">Cystic Fibrosis Foundation Patient Registry 2021 Annual Data Report, Bethesda, Maryland, Cystic Fibrosis Foundation. https://www.cff.org/medical-professionals/patient-registry. Access date: 22.01.2024</mixed-citation></citation-alternatives></ref><ref id="cit85"><label>85</label><citation-alternatives><mixed-citation xml:lang="ru">UK Cystic Fibrosis Registry 2022 Annual Data Report, 2023, https://www.cysticfibrosis.org.uk/sites/default/files/2023-12/CFT_2022_Annual_Data_Report_Dec2023.pdf. Дата доступа: 22.01.2024</mixed-citation><mixed-citation xml:lang="en">UK Cystic Fibrosis Registry 2022 Annual Data Report, 2023, https://www.cysticfibrosis.org.uk/sites/default/files/2023-12/CFT_2022_Annual_Data_Report_Dec2023.pdf. Access date:: 22.01.2024</mixed-citation></citation-alternatives></ref><ref id="cit86"><label>86</label><citation-alternatives><mixed-citation xml:lang="ru">Petrova N., Balinova N., Marakhonov A., Vasilyeva T., Kashirskaya N., Galkina V., Ginter E., Kutsev S., Zinchenko R. Ethnic Differences in the Frequency of CFTR Gene Mutations in Populations of the European and North Caucasian Part of the Russian Federation. Front Genet. 2021 Jun 16;12:678374. doi: 10.3389/fgene.2021.678374</mixed-citation><mixed-citation xml:lang="en">Petrova N., Balinova N., Marakhonov A., Vasilyeva T., Kashirskaya N., Galkina V., Ginter E., Kutsev S., Zinchenko R. Ethnic Differences in the Frequency of CFTR Gene Mutations in Populations of the European and North Caucasian Part of the Russian Federation. Front Genet. 2021 Jun 16;12:678374. doi: 10.3389/fgene.2021.678374</mixed-citation></citation-alternatives></ref><ref id="cit87"><label>87</label><citation-alternatives><mixed-citation xml:lang="ru">Регистр пациентов с муковисцидозом в Российской Федерации. 2021 год./ Под редакцией С.А. Красовского, М.А. Стариновой, А.Ю. Воронковой, Е.Л. Амелиной, Н.Ю. Каширской, Е.И. Кондратьевой, Л.П. Назаренко – СПб.: Благотворительный фонд «Острова», 2023, 81 с.</mixed-citation><mixed-citation xml:lang="en">Registr patsiyentov s mukovistsidozom v Rossiyskoy Federatsii. 2021 god./ Pod red. S.A. Krasovskogo, M.A. Starinovoy, A.YU. Voronkovoy, Ye.L. Amelinoy, N.YU. Kashirskoy, Ye.I. Kondrat’yevoy, L.P. Nazarenko [Registry of patients with cystic fibrosis in the Russian Federation. 2021. / Ed. by S.A. Krasovsky, M.A. Starinova, A.Yu. Voronkova, E.L. Amelina, N.Yu. Kashirskaya, E.I. Kondratieva, L.P. Nazarenko – SPb.: Blagotvoritel’nyy fond «Ostrova» [St. Petersburg: Charitable Foundation “Ostrova”], 2023, 81 p. (In Russ.)</mixed-citation></citation-alternatives></ref><ref id="cit88"><label>88</label><citation-alternatives><mixed-citation xml:lang="ru">Maeder M.L., Thibodeau-Beganny S., Osiak A., et al. Rapid “opensource” engineering of customized zinc-finger nucleases for highly efficient gene modification. Mol Cell. 2008 Jul 25;31(2):294-301. doi: 10.1016/j.molcel.2008.06.016.</mixed-citation><mixed-citation xml:lang="en">Maeder M.L., Thibodeau-Beganny S., Osiak A., et al. Rapid “opensource” engineering of customized zinc-finger nucleases for highly efficient gene modification. Mol Cell. 2008 Jul 25;31(2):294-301. doi: 10.1016/j.molcel.2008.06.016.</mixed-citation></citation-alternatives></ref><ref id="cit89"><label>89</label><citation-alternatives><mixed-citation xml:lang="ru">Ramalingam S., London V., Kandavelou K., et al. Generation and genetic engineering of human induced pluripotent stem cells using designed zinc finger nucleases. Stem Cells Dev. 2013; 22(4): 595-610.</mixed-citation><mixed-citation xml:lang="en">Ramalingam S., London V., Kandavelou K., et al. Generation and genetic engineering of human induced pluripotent stem cells using designed zinc finger nucleases. Stem Cells Dev. 2013; 22(4): 595-610.</mixed-citation></citation-alternatives></ref><ref id="cit90"><label>90</label><citation-alternatives><mixed-citation xml:lang="ru">Xia E., Zhang Y., Cao H., et al. TALEN-Mediated Gene Targeting for Cystic Fibrosis-Gene Therapy. Genes (Basel). 2019 Jan 11;10(1):39. doi: 10.3390/genes10010039.</mixed-citation><mixed-citation xml:lang="en">Xia E., Zhang Y., Cao H., et al. TALEN-Mediated Gene Targeting for Cystic Fibrosis-Gene Therapy. Genes (Basel). 2019 Jan 11;10(1):39. doi: 10.3390/genes10010039.</mixed-citation></citation-alternatives></ref><ref id="cit91"><label>91</label><citation-alternatives><mixed-citation xml:lang="ru">Vaidyanathan S., Kerschner J.L., Paranjapye A., et al. Investigating adverse genomic and regulatory changes caused by replacement of the full-length CFTR cDNA using Cas9 and AAV. Mol Ther Nucleic Acids. 2024 Feb 2;35(1):102134. doi: 10.1016/j.omtn.2024.102134</mixed-citation><mixed-citation xml:lang="en">Vaidyanathan S., Kerschner J.L., Paranjapye A., et al. Investigating adverse genomic and regulatory changes caused by replacement of the full-length CFTR cDNA using Cas9 and AAV. Mol Ther Nucleic Acids. 2024 Feb 2;35(1):102134. doi: 10.1016/j.omtn.2024.102134</mixed-citation></citation-alternatives></ref></ref-list><fn-group><fn fn-type="conflict"><p>The authors declare that there are no conflicts of interest present.</p></fn></fn-group></back></article>
